MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Actinomyces bowdenii
WMus004.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 457
bases: 3,191,231 bps
CDS: 2,590
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 56
misc RNA:
Total features: 2,650
Total number of protein coding genes annotated/found:
2,590
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5001|JADGKF010000217.1
SEQF5001_01045
Genome Viewer
NA
AA
1278/426
41-1318
Heme chaperone HemW
SEQF5001|JADGKF010000217.1
SEQF5001_01046
Genome Viewer
NA
AA
825/275
1528-2352
hypothetical protein
SEQF5001|JADGKF010000217.1
SEQF5001_01047
Genome Viewer
NA
AA
1410/470
2513-3922
hypothetical protein
SEQF5001|JADGKF010000217.1
SEQF5001_01048
Genome Viewer
NA
AA
870/290
4832-3963
hypothetical protein
SEQF5001|JADGKF010000249.1
SEQF5001_01222
Genome Viewer
NA
AA
711/237
536-1246
hypothetical protein
SEQF5001|JADGKF010000249.1
SEQF5001_01223
Genome Viewer
NA
AA
1596/532
1449-3044
lipid kinase YegS
SEQF5001|JADGKF010000332.1
SEQF5001_01616
Genome Viewer
NA
AA
246/82
215-460
hypothetical protein
SEQF5001|JADGKF010000332.1
SEQF5001_01617
Genome Viewer
NA
AA
723/241
686-1408
hypothetical protein
SEQF5001|JADGKF010000332.1
SEQF5001_01618
Genome Viewer
NA
AA
129/43
1539-1411
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02479
Genome Viewer
NA
AA
558/186
68-625
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02480
Genome Viewer
NA
AA
2274/758
625-2898
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02481
Genome Viewer
NA
AA
471/157
3351-3821
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02482
Genome Viewer
NA
AA
3435/1145
7290-3856
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02483
Genome Viewer
NA
AA
1362/454
8648-7287
3'%2C5'-cyclic adenosine monophosphate phosphodiesterase CpdA
SEQF5001|JADGKF010000087.1
SEQF5001_02484
Genome Viewer
NA
AA
738/246
9490-8753
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02485
Genome Viewer
NA
AA
615/205
9591-10205
hypothetical protein
SEQF5001|JADGKF010000087.1
SEQF5001_02486
Genome Viewer
NA
AA
837/279
11148-10312
Undecaprenyl-diphosphatase
SEQF5001|JADGKF010000212.1
SEQF5001_01022
Genome Viewer
NA
AA
780/260
1695-916
hypothetical protein
SEQF5001|JADGKF010000212.1
SEQF5001_01023
Genome Viewer
NA
AA
894/298
2787-1894
hypothetical protein
SEQF5001|JADGKF010000212.1
SEQF5001_01024
Genome Viewer
NA
AA
252/84
3630-3379
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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